Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876976.1_cds_XP_016436329.1_32200
CDS Infomation

[gene=LOC107762477] [db_xref=GeneID:107762477] [protein=DEAD-box ATP-dependent RNA helicase 57 isoform X2] [protein_id=XP_016436329.1] [location=join(66091..66171,66565..66694,66813..66937,67070..67161,68265..68361,68444..68524,68617..68849,69303..69497,69696..69786,72739..72861,73493..73643,73825..74024)] [gbkey=CDS]
Sequence

ATGGAAAAAGATGCATCTTTTTTGTTCGGCGGCATCACTTTCAATCGTAAAAAGTTTGCC
ACCGATTTTGACAGGTTTAAGGGGCATAAAACAAGTGACAACTCATTAGAGAAGCTGGAG
TTAGTTGAGAATGAAAAATCCGAAATGGAAGATGCGACAAATACCTGTGTTGGTAAGAAG
AGGAAGAGAAAGGAGAAGGGAACAGTTCCTGACTCAGTGGACGGATTCTCCGTTTTCAAA
AATTCGAAATTGAAAAAGGAAGCTGCCAGTGAAGAGAATGATCAATCTGCAAATGAACTG
CTTGAGGGAAAAAAAGAATATCATCGGCAATTGGAGAGGGATGCACTTTTCCGGAAGTTA
CACGGCATTCATGTTTCTGGAAGTAATGTCCCTTCGCCATTGCACAGTTTTGCAGAATTA
AGATCAAGATATAAATGTCGATTATATCTATTACGCAACCTGGCAGAACTGGGATTCAAA
GAACCAACACCAATCCAAAGACAGGCTATTCCAGTCCTCTTATCTGGACGGGAATGCTTT
GCTTGTGCACCTACTGGTTCTGGAAAAACATTTGCTTTTGTCTTTCCAATACTTGTGAAA
CTCAAGGATACTTCAAATGATGGTGTCCGAGCTGTAATTCTTTCCCCTACAAAAGAGTTA
GCTGCTCAGACTACAAGAGAATGCAGAAAGTTGGCTAAAGGGAAGAAGTTCTACATCAGG
TTGATGACTAAAAAGCTCGCTAAAAGTGGAGACTTTTCTAAATTGCGATGTGATATACTC
ATCTCGACACCATTGCGCTTACAGTTTGCTATCCGCAAAGGAAAGCTTGATTTAAGTAGG
GTTGAATTTCTTGTCTTAGATGAATCGGATAAGCTTTTTGAGCCTGGCTTGCTAGAGCAG
GTTGATTTTGTGGTGAACGCGTGCACAAATCCTTCAATTCTTCGGTCGTTGTTCAGTGCT
ACTTTACCTGATATAGTTGAAGACAGAGCGCGTACAATAATGCATGATGCTGTTCGAGTC
ATTATTGGTAGGAAAAATTCTGCTTCCGAAACAATAAAGCAAAAGTTGGTATTCGTAGGG
AGTGAAGAAGGAAAACTTCTAGCTCTTCGTCAAAGCTTTGCAGAGAGTTTGAATCCACCG
GTGCTAGTATTCGTTCAAAACAAGGAGCGCGCAAAGGAGCTATATGACGAACTAAAATTG
GAAGATTTTCGAGCTGATGTTATCCATTCAGATCTTTCTCAGACACAGAGAGAAAATGCT
GTTGATAACTTTAGAGCTGGAAAAACATGGGTTCTAATTGCCACGGATGTGGTGTCCCGG
GGAATGGATTTCAAAGGGGTCAACTGCGTATTAAATTATGATTTTCCAGACGCTGCTGCA
GCATACATTCACAGAATTGGACGTACCGGAAGAGCAGGAAGGAGAGGAGAGGCTATTACA
TTTTATACTGAAGCAGATATTCCTTTTTTGAGGAACATAGCAAATGTTATTACTTCTTCT
GGTGGTGAGGTTCCCGAGTGGATCATGTCAATGACCAAGAAAAAGTGGAAGAAACACAGG
CCACAAAGAGAAACCATTTCAACTCAGCCAGATATATGA

Peptide Sequence

PEP ID

XP_016436329.1
PEP Infomation

PREDICTED: DEAD-box ATP-dependent RNA helicase 57 isoform X2 [Nicotiana tabacum]
Sequence

MEKDASFLFGGITFNRKKFATDFDRFKGHKTSDNSLEKLELVENEKSEMEDATNTCVGKK
RKRKEKGTVPDSVDGFSVFKNSKLKKEAASEENDQSANELLEGKKEYHRQLERDALFRKL
HGIHVSGSNVPSPLHSFAELRSRYKCRLYLLRNLAELGFKEPTPIQRQAIPVLLSGRECF
ACAPTGSGKTFAFVFPILVKLKDTSNDGVRAVILSPTKELAAQTTRECRKLAKGKKFYIR
LMTKKLAKSGDFSKLRCDILISTPLRLQFAIRKGKLDLSRVEFLVLDESDKLFEPGLLEQ
VDFVVNACTNPSILRSLFSATLPDIVEDRARTIMHDAVRVIIGRKNSASETIKQKLVFVG
SEEGKLLALRQSFAESLNPPVLVFVQNKERAKELYDELKLEDFRADVIHSDLSQTQRENA
VDNFRAGKTWVLIATDVVSRGMDFKGVNCVLNYDFPDAAAAYIHRIGRTGRAGRRGEAIT
FYTEADIPFLRNIANVITSSGGEVPEWIMSMTKKKWKKHRPQRETISTQPDI

Transcript Sequence

Gene sequence data has not been registered.